Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanz family protein | AMED_RS46170 | Not Available | Positive | 9880499 - 9881155 | 23336.0 |
| gnat family n-acetyltransferase | AMED_RS46175 | Not Available | Positive | 9881333 - 9882085 | 26771.9 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | AMED_RS46180 | Not Available | Negative | 9882082 - 9882498 | 14972.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | AMED_RS46185 | Not Available | Negative | 9882547 - 9883617 | 37264.9 |
| amidophosphoribosyltransferase | AMED_RS46190 | Not Available | Negative | 9883648 - 9885174 | 54055.4 |
| hypothetical protein | AMED_RS46195 | Not Available | Negative | 9885293 - 9885598 | 11188.2 |
| duf397 domain-containing protein | AMED_RS46200 | Not Available | Negative | 9885585 - 9885824 | 8445.88 |
| helix-turn-helix transcriptional regulator | AMED_RS46205 | Not Available | Negative | 9886079 - 9886957 | 33641.6 |
| sam-dependent methyltransferase | AMED_RS46210 | Not Available | Positive | 9887158 - 9887955 | 29764.3 |
| sterol carrier family protein | AMED_RS46215 | Not Available | Negative | 9887969 - 9888349 | 13360.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
