Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | AMED_RS46070 | Not Available | Positive | 9863544 - 9863969 | 14722.1 |
| duf4395 domain-containing protein | AMED_RS46075 | Not Available | Positive | 9864235 - 9864669 | 15236.9 |
| sulfurtransferase | AMED_RS46080 | Not Available | Positive | 9864699 - 9865535 | 31370.4 |
| duf1416 domain-containing protein | AMED_RS46085 | Not Available | Positive | 9865535 - 9865846 | 10334.9 |
| fabp family protein | AMED_RS46090 | Not Available | Positive | 9866081 - 9866695 | 22508.5 |
| allophanate hydrolase subunit 1 | AMED_RS46095 | Not Available | Positive | 9866700 - 9867296 | 21015.0 |
| biotin-dependent carboxyltransferase family protein | AMED_RS46100 | Not Available | Positive | 9867308 - 9868138 | 27716.3 |
| hypothetical protein | AMED_RS46105 | Not Available | Positive | 9868237 - 9868662 | 15138.0 |
| aminodeoxychorismate lyase | AMED_RS46110 | Not Available | Negative | 9868641 - 9869489 | 30116.3 |
| folate-binding protein ygfz | AMED_RS46115 | Not Available | Positive | 9869624 - 9870754 | 40252.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
