Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribose-phosphate aldolase | AMED_RS04525 | Not Available | Negative | 942180 - 943154 | 34560.4 |
| duf1707 domain-containing protein | AMED_RS04530 | Not Available | Negative | 943239 - 943853 | 21448.7 |
| protein-tyrosine phosphatase family protein | AMED_RS04535 | Not Available | Positive | 943939 - 944361 | 15568.5 |
| uracil phosphoribosyltransferase | AMED_RS04540 | Not Available | Positive | 944367 - 944990 | 22258.0 |
| pentapeptide repeat-containing protein | AMED_RS04545 | Not Available | Positive | 945025 - 945936 | 33640.0 |
| rna polymerase sigma factor | AMED_RS04550 | Not Available | Positive | 945972 - 946556 | 21644.5 |
| hypothetical protein | AMED_RS04555 | Not Available | Positive | 946553 - 947830 | 44575.3 |
| tetr/acrr family transcriptional regulator | AMED_RS04560 | Not Available | Negative | 947803 - 948420 | 21920.2 |
| merr family transcriptional regulator | AMED_RS04565 | Not Available | Positive | 948504 - 948905 | 15108.2 |
| aldo/keto reductase | AMED_RS04570 | Not Available | Positive | 948956 - 949879 | 32909.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
