Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | AMED_RS46020 | Not Available | Positive | 9852098 - 9852787 | 25508.4 |
| lcp family protein | AMED_RS46025 | Not Available | Positive | 9854209 - 9855636 | 51531.1 |
| phosphate signaling complex protein phou | AMED_RS46030 | Not Available | Positive | 9855720 - 9856385 | 24433.1 |
| phosphate abc transporter atp-binding protein pstb | AMED_RS46035 | Not Available | Negative | 9856513 - 9857289 | 28003.7 |
| phosphate abc transporter permease psta | AMED_RS46040 | Not Available | Negative | 9857300 - 9858217 | 32824.2 |
| phosphate abc transporter permease subunit pstc | AMED_RS46045 | Not Available | Negative | 9858220 - 9859140 | 32513.2 |
| phosphate abc transporter substrate-binding protein psts | AMED_RS46050 | Not Available | Negative | 9859339 - 9860469 | 37860.5 |
| mycothiol synthase | AMED_RS46055 | Not Available | Negative | 9860695 - 9861600 | 33225.0 |
| response regulator transcription factor | AMED_RS46060 | Not Available | Negative | 9861701 - 9862480 | 27952.5 |
| duf2993 domain-containing protein | AMED_RS46065 | Not Available | Positive | 9862633 - 9863532 | 31842.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
