Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | AMED_RS45970 | Not Available | Positive | 9843560 - 9844390 | 29649.2 |
| ricin domain-containing protein | AMED_RS45975 | Not Available | Positive | 9844382 - 9845083 | 23790.7 |
| vc0807 family protein | AMED_RS45980 | Not Available | Positive | 9845299 - 9845952 | 22786.3 |
| gntr family transcriptional regulator | AMED_RS45985 | Not Available | Positive | 9845985 - 9846677 | 25044.8 |
| adp-ribosylglycohydrolase family protein | AMED_RS45990 | Not Available | Positive | 9846674 - 9847669 | 33464.0 |
| pfkb family carbohydrate kinase | AMED_RS45995 | Not Available | Positive | 9847666 - 9848541 | 29999.7 |
| cytosine permease | AMED_RS46000 | Not Available | Positive | 9848538 - 9849971 | 50151.7 |
| cysteine hydrolase family protein | AMED_RS46005 | Not Available | Positive | 9849968 - 9850498 | 18947.6 |
| alpha/beta fold hydrolase | AMED_RS46010 | Not Available | Positive | 9850508 - 9851341 | 30641.0 |
| isopentenyl-diphosphate delta-isomerase | AMED_RS46015 | Not Available | Positive | 9851429 - 9851992 | 20934.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
