Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | AMED_RS45920 | Not Available | Positive | 9832242 - 9832718 | 17453.1 |
| rna polymerase recycling motor atpase helr | AMED_RS45925 | Not Available | Negative | 9832761 - 9834965 | 80238.0 |
| lamg-like jellyroll fold domain-containing protein | AMED_RS45930 | Not Available | Negative | 9835065 - 9836882 | 66530.4 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | AMED_RS45935 | Not Available | Positive | 9836962 - 9837354 | 14605.2 |
| duf6328 family protein | AMED_RS45940 | Not Available | Negative | 9837330 - 9837812 | 17392.8 |
| tigr03667 family ppox class f420-dependent oxidoreductase | AMED_RS45945 | Not Available | Negative | 9837908 - 9838297 | 13903.4 |
| duf2339 domain-containing protein | AMED_RS45950 | Not Available | Negative | 9838364 - 9840268 | 65098.8 |
| gfo/idh/moca family protein | AMED_RS45955 | Not Available | Negative | 9840314 - 9841279 | 34181.0 |
| hypothetical protein | AMED_RS45960 | Not Available | Positive | 9841337 - 9841876 | 18148.0 |
| trna dihydrouridine synthase dusb | AMED_RS45965 | Not Available | Positive | 9841926 - 9843065 | 40822.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
