Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | AMED_RS45870 | Not Available | Negative | 9821934 - 9822767 | 30038.9 |
| abc transporter permease | AMED_RS45875 | Not Available | Negative | 9822873 - 9823700 | 29737.2 |
| abc transporter permease | AMED_RS45880 | Not Available | Negative | 9823697 - 9824590 | 31961.1 |
| abc transporter atp-binding protein | AMED_RS45885 | Not Available | Negative | 9824661 - 9825704 | 37486.3 |
| extracellular solute-binding protein | AMED_RS45890 | Not Available | Negative | 9825701 - 9826927 | 44026.7 |
| gntr family transcriptional regulator | AMED_RS45895 | Not Available | Positive | 9826990 - 9827694 | 24672.2 |
| dihydrodipicolinate synthase family protein | AMED_RS45900 | Not Available | Positive | 9827691 - 9828596 | 31673.8 |
| acyl-coa desaturase | AMED_RS45905 | Not Available | Positive | 9829071 - 9830102 | 38412.5 |
| rgcvc family protein | AMED_RS45910 | Not Available | Positive | 9830099 - 9830281 | 6074.02 |
| diaminopimelate decarboxylase | AMED_RS45915 | Not Available | Positive | 9830684 - 9832027 | 47750.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
