Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 9814274 - 9814361 | Not Available |
| csbd family protein | AMED_RS45825 | Not Available | Negative | 9814395 - 9814610 | 7923.53 |
| nucleoside deaminase | AMED_RS45830 | Not Available | Negative | 9814632 - 9815060 | 14950.2 |
| trna adenosine deaminase-associated protein | AMED_RS45835 | Not Available | Negative | 9815084 - 9815566 | 17141.2 |
| m20 family metallopeptidase | AMED_RS45840 | Not Available | Positive | 9815644 - 9816873 | 42935.6 |
| phosphocholine-specific phospholipase c | AMED_RS45845 | Not Available | Negative | 9816870 - 9818819 | 70521.8 |
| voc family protein | AMED_RS45850 | Not Available | Positive | 9818889 - 9819266 | 13724.2 |
| heme-degrading domain-containing protein | AMED_RS45855 | Not Available | Positive | 9819292 - 9819759 | 17023.1 |
| dihydrofolate reductase family protein | AMED_RS45860 | Not Available | Positive | 9819837 - 9820460 | 22863.0 |
| threonine--trna ligase | AMED_RS45865 | Not Available | Positive | 9820602 - 9821795 | 43454.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
