Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS45770 | Not Available | Negative | 9804246 - 9804815 | 20207.3 |
| putative t7ss-secreted protein | AMED_RS45775 | Not Available | Negative | 9804815 - 9806029 | 41708.7 |
| hypothetical protein | AMED_RS45780 | Not Available | Negative | 9806026 - 9806673 | 21051.4 |
| endonuclease/exonuclease/phosphatase family protein | AMED_RS45785 | Not Available | Negative | 9806815 - 9809280 | 85332.9 |
| capa family protein | AMED_RS45790 | Not Available | Positive | 9809407 - 9810345 | 32028.2 |
| limonene-1,2-epoxide hydrolase family protein | AMED_RS45795 | Not Available | Negative | 9810637 - 9811083 | 16338.5 |
| taud/tfda family dioxygenase | AMED_RS45800 | Not Available | Negative | 9811100 - 9812020 | 34789.1 |
| hypothetical protein | AMED_RS45805 | Not Available | Positive | 9812331 - 9812702 | 12747.0 |
| hypothetical protein | AMED_RS45810 | Not Available | Positive | 9812699 - 9813271 | 18726.8 |
| sdr family oxidoreductase | AMED_RS45815 | Not Available | Negative | 9813264 - 9814046 | 27807.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
