Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS45720 | Not Available | Positive | 9795549 - 9796055 | 17211.5 |
| serine/threonine-protein kinase | AMED_RS45725 | Not Available | Negative | 9796045 - 9796935 | 31799.9 |
| class i sam-dependent dna methyltransferase | AMED_RS45730 | Not Available | Negative | 9796944 - 9798638 | 60557.8 |
| pp2c family serine/threonine-protein phosphatase | AMED_RS45735 | Not Available | Positive | 9798708 - 9799460 | 26478.4 |
| Trna-ser | Not Available | Not Available | Positive | 9799505 - 9799589 | Not Available |
| hypothetical protein | AMED_RS45745 | Not Available | Positive | 9800120 - 9800380 | 8721.05 |
| hypothetical protein | AMED_RS45750 | Not Available | Positive | 9800385 - 9800630 | 8679.28 |
| ftsk/spoiiie domain-containing protein | AMED_RS45755 | Not Available | Positive | 9800665 - 9803394 | 97692.6 |
| hypothetical protein | AMED_RS45760 | Not Available | Positive | 9803391 - 9803798 | 15149.9 |
| ybab/ebfc family nucleoid-associated protein | AMED_RS45765 | Not Available | Negative | 9803795 - 9804163 | 13127.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
