Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMED_RS45670 | Not Available | Negative | 9784877 - 9785626 | 27230.9 |
| hypothetical protein | AMED_RS45675 | Not Available | Positive | 9785792 - 9786415 | 20399.7 |
| sensor histidine kinase | AMED_RS45680 | Not Available | Positive | 9786690 - 9787844 | 40842.2 |
| response regulator transcription factor | AMED_RS45685 | Not Available | Positive | 9787841 - 9788506 | 23921.0 |
| hypothetical protein | AMED_RS45690 | Not Available | Positive | 9788516 - 9788713 | 6976.0 |
| nitroreductase family deazaflavin-dependent oxidoreductase | AMED_RS45695 | Not Available | Negative | 9788703 - 9789149 | 16740.3 |
| tetr/acrr family transcriptional regulator | AMED_RS45700 | Not Available | Positive | 9789277 - 9789948 | 24455.2 |
| 3-hydroxyacyl-coa dehydrogenase | AMED_RS45705 | Not Available | Positive | 9789986 - 9791509 | 53079.9 |
| pqq-dependent sugar dehydrogenase | AMED_RS45710 | Not Available | Negative | 9791569 - 9794553 | 104900.0 |
| l,d-transpeptidase | AMED_RS45715 | Not Available | Negative | 9794664 - 9795332 | 21717.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
