Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 9773579 - 9773673 | Not Available |
| atp/gtp-binding protein | AMED_RS45625 | Not Available | Negative | 9773739 - 9774338 | 21153.3 |
| duf742 domain-containing protein | AMED_RS45630 | Not Available | Negative | 9774316 - 9774669 | 12843.7 |
| roadblock/lc7 domain-containing protein | AMED_RS45635 | Not Available | Negative | 9774736 - 9775170 | 14935.1 |
| nitrate- and nitrite sensing domain-containing protein | AMED_RS45640 | Not Available | Negative | 9775167 - 9777977 | 98576.3 |
| abc transporter atp-binding protein | AMED_RS45645 | Not Available | Negative | 9778003 - 9778791 | 28354.3 |
| abc transporter permease | AMED_RS45650 | Not Available | Negative | 9778788 - 9779738 | 33600.3 |
| abc transporter substrate-binding protein | AMED_RS45655 | Not Available | Negative | 9779735 - 9780748 | 35767.2 |
| glycosyltransferase family 39 protein | AMED_RS45660 | Not Available | Negative | 9781402 - 9783306 | 65356.4 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS45665 | Not Available | Negative | 9783388 - 9784899 | 53430.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
