Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination mediator recr | AMED_RS45570 | Not Available | Negative | 9764381 - 9764977 | 21813.5 |
| ybab/ebfc family nucleoid-associated protein | AMED_RS45575 | Not Available | Negative | 9764983 - 9765342 | 11925.1 |
| n-acetylmuramoyl-l-alanine amidase | AMED_RS45580 | Not Available | Positive | 9765421 - 9766284 | 28662.4 |
| helix-turn-helix domain-containing protein | AMED_RS45585 | Not Available | Negative | 9766269 - 9766622 | 12770.6 |
| tigr03618 family f420-dependent ppox class oxidoreductase | AMED_RS45590 | Not Available | Positive | 9766672 - 9767103 | 15949.0 |
| is3 family transposase | AMED_RS45595 | Not Available | Negative | 9767208 - 9768089 | 33091.7 |
| transposase | AMED_RS45600 | Not Available | Negative | 9768086 - 9768376 | 11061.1 |
| dna polymerase iii subunit gamma and tau | AMED_RS45605 | Not Available | Negative | 9768624 - 9770816 | 75694.3 |
| alf repeat-containing protein | AMED_RS45610 | Not Available | Negative | 9770898 - 9772424 | 52478.9 |
| spermidine synthase | AMED_RS45615 | Not Available | Positive | 9772480 - 9773355 | 31174.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
