Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AMED_RS45520 | Not Available | Negative | 9752264 - 9753265 | 35914.0 |
| abc transporter substrate-binding protein | AMED_RS45525 | Not Available | Negative | 9753352 - 9754899 | 56589.4 |
| duf2304 domain-containing protein | AMED_RS45530 | Not Available | Negative | 9754931 - 9755302 | 13162.6 |
| glycosyltransferase family 2 protein | AMED_RS45535 | Not Available | Negative | 9755316 - 9756065 | 26233.8 |
| duf6541 family protein | AMED_RS45540 | Not Available | Negative | 9756078 - 9758048 | 69071.1 |
| duf6541 family protein | AMED_RS45545 | Not Available | Positive | 9758214 - 9760274 | 72284.2 |
| hypothetical protein | AMED_RS45550 | Not Available | Negative | 9760284 - 9761573 | 44188.2 |
| glycosyltransferase family 2 protein | AMED_RS45555 | Not Available | Negative | 9761570 - 9762589 | 36710.9 |
| udp-n-acetyl glucosamine 2-epimerase | AMED_RS45560 | Not Available | Positive | 9762661 - 9763770 | 41633.3 |
| glucosaminidase domain-containing protein | AMED_RS45565 | Not Available | Positive | 9763827 - 9764384 | 19960.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
