Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS45470 | Not Available | Positive | 9743321 - 9743923 | 21593.8 |
| lysr family transcriptional regulator | AMED_RS45475 | Not Available | Negative | 9743913 - 9744881 | 34736.9 |
| eama family transporter | AMED_RS45480 | Not Available | Positive | 9744968 - 9745861 | 31188.3 |
| deda family protein | AMED_RS45485 | Not Available | Negative | 9745858 - 9746499 | 23020.5 |
| sgcj/ecac family oxidoreductase | AMED_RS45490 | Not Available | Negative | 9747116 - 9747547 | 16053.0 |
| ycii family protein | AMED_RS45495 | Not Available | Positive | 9747629 - 9747985 | 13069.6 |
| rna polymerase sigma factor | AMED_RS45500 | Not Available | Positive | 9747982 - 9749178 | 42968.4 |
| abc transporter atp-binding protein | AMED_RS45505 | Not Available | Negative | 9749226 - 9750338 | 40493.5 |
| abc transporter atp-binding protein | AMED_RS45510 | Not Available | Negative | 9750335 - 9751330 | 36075.1 |
| abc transporter permease | AMED_RS45515 | Not Available | Negative | 9751338 - 9752267 | 32806.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
