Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS45420 | Not Available | Positive | 9733551 - 9734648 | 40041.9 |
| aspartate-semialdehyde dehydrogenase | AMED_RS45425 | Not Available | Negative | 9734701 - 9735741 | 36364.4 |
| aspartate kinase | AMED_RS45430 | Not Available | Negative | 9735741 - 9737006 | 44409.6 |
| nitroreductase family protein | AMED_RS45435 | Not Available | Positive | 9737235 - 9737825 | 21166.4 |
| hypothetical protein | AMED_RS45440 | Not Available | Negative | 9737820 - 9738185 | 12916.7 |
| 2-isopropylmalate synthase | AMED_RS45445 | Not Available | Positive | 9738467 - 9740230 | 65719.5 |
| yafy family protein | AMED_RS45450 | Not Available | Positive | 9740234 - 9741205 | 34782.6 |
| sdr family oxidoreductase | AMED_RS45455 | Not Available | Negative | 9741325 - 9742227 | 32305.2 |
| deda family protein | AMED_RS45460 | Not Available | Positive | 9742265 - 9742654 | 13719.0 |
| peroxiredoxin-like family protein | AMED_RS45465 | Not Available | Negative | 9742641 - 9743261 | 22323.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
