Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | AMED_RS45320 | Not Available | Negative | 9712725 - 9713765 | 38541.3 |
| hypothetical protein | AMED_RS45325 | Not Available | Negative | 9713762 - 9714469 | 24859.8 |
| glycosyltransferase family 2 protein | AMED_RS45330 | Not Available | Positive | 9714791 - 9715801 | 36496.9 |
| atp-grasp domain-containing protein | AMED_RS45335 | Not Available | Positive | 9715798 - 9717039 | 43400.0 |
| hypothetical protein | AMED_RS45340 | Not Available | Positive | 9717036 - 9718286 | 42515.2 |
| carbamoyltransferase c-terminal domain-containing protein | AMED_RS45345 | Not Available | Positive | 9718313 - 9720124 | 66240.2 |
| hypothetical protein | AMED_RS45350 | Not Available | Positive | 9720121 - 9720843 | 25977.1 |
| tigr03085 family metal-binding protein | AMED_RS45355 | Not Available | Negative | 9720809 - 9721435 | 22434.6 |
| glutamate decarboxylase | AMED_RS45360 | Not Available | Negative | 9721483 - 9722871 | 51113.0 |
| dps family protein | AMED_RS45365 | Not Available | Negative | 9722945 - 9723421 | 17415.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
