Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin domain-containing protein | AMED_RS45220 | Not Available | Negative | 9694854 - 9695120 | 9300.93 |
| mbl fold metallo-hydrolase | AMED_RS45225 | Not Available | Negative | 9695117 - 9695887 | 27377.3 |
| nudix domain-containing protein | AMED_RS45230 | Not Available | Negative | 9695884 - 9696702 | 29332.5 |
| hypothetical protein | AMED_RS45235 | Not Available | Negative | 9696815 - 9697939 | 39640.5 |
| hypothetical protein | AMED_RS45240 | Not Available | Negative | 9697976 - 9698602 | 22949.5 |
| rida family protein | AMED_RS45245 | Not Available | Negative | 9698602 - 9699057 | 15250.3 |
| duf4177 domain-containing protein | AMED_RS45250 | Not Available | Negative | 9699062 - 9699223 | 6004.18 |
| hypothetical protein | AMED_RS45255 | Not Available | Positive | 9699350 - 9699598 | 8268.62 |
| arsa-related p-loop atpase | AMED_RS45260 | Not Available | Positive | 9699620 - 9700627 | 35827.0 |
| arsa family atpase | AMED_RS45265 | Not Available | Positive | 9700624 - 9701745 | 40030.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
