Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | AMED_RS45175 | Not Available | Positive | 9687135 - 9687809 | 24841.9 |
| is4 family transposase | AMED_RS45180 | Not Available | Negative | 9687826 - 9689208 | 49429.3 |
| mfs transporter | AMED_RS45185 | Not Available | Positive | 9689800 - 9691053 | 42148.0 |
| dna polymerase iii subunit beta | AMED_RS45190 | Not Available | Positive | 9691094 - 9692155 | 36266.7 |
| hypothetical protein | AMED_RS45195 | Not Available | Negative | 9692157 - 9692327 | 5938.09 |
| lrp/asnc family transcriptional regulator | AMED_RS45200 | Not Available | Negative | 9692447 - 9692824 | 13066.7 |
| asnc family protein | AMED_RS45205 | Not Available | Negative | 9692809 - 9692964 | 5647.68 |
| voc family protein | AMED_RS45210 | Not Available | Positive | 9693049 - 9693618 | 20795.3 |
| hypothetical protein | AMED_RS49650 | Not Available | Positive | 9693588 - 9693716 | 4732.54 |
| carboxylesterase family protein | AMED_RS45215 | Not Available | Positive | 9693713 - 9694888 | 41763.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
