Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | AMED_RS45125 | Not Available | Positive | 9678613 - 9679800 | 41273.3 |
| phage holin family protein | AMED_RS45130 | Not Available | Positive | 9679843 - 9680334 | 17695.7 |
| alpha/beta fold hydrolase | AMED_RS45135 | Not Available | Positive | 9680340 - 9681266 | 33604.8 |
| fad-dependent monooxygenase | AMED_RS45140 | Not Available | Negative | 9681253 - 9682347 | 39377.8 |
| tetr/acrr family transcriptional regulator | AMED_RS45145 | Not Available | Positive | 9682457 - 9683338 | 32026.8 |
| marp family serine protease | AMED_RS45150 | Not Available | Negative | 9683335 - 9684519 | 40691.2 |
| coa pyrophosphatase | AMED_RS45155 | Not Available | Negative | 9684524 - 9685219 | 24426.0 |
| tlpa disulfide reductase family protein | AMED_RS45160 | Not Available | Negative | 9685216 - 9685815 | 20116.3 |
| endonuclease iii | AMED_RS45165 | Not Available | Negative | 9685812 - 9686495 | 24931.0 |
| hypothetical protein | AMED_RS45170 | Not Available | Positive | 9686734 - 9686985 | 9751.14 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
