Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid 6-phosphate etherase | AMED_RS45075 | Not Available | Positive | 9668809 - 9669738 | 31764.2 |
| hoxn/hupn/nixa family nickel/cobalt transporter | AMED_RS45080 | Not Available | Positive | 9669795 - 9670886 | 38945.1 |
| hypothetical protein | AMED_RS45085 | Not Available | Negative | 9670883 - 9671605 | 24520.4 |
| phosphoribosyltransferase | AMED_RS45090 | Not Available | Negative | 9671602 - 9672099 | 18349.1 |
| gnat family n-acetyltransferase | AMED_RS45095 | Not Available | Positive | 9672214 - 9672816 | 22468.7 |
| acetate--coa ligase | AMED_RS45100 | Not Available | Positive | 9672917 - 9674899 | 72181.0 |
| duf6319 family protein | AMED_RS45105 | Not Available | Positive | 9675042 - 9675527 | 16541.0 |
| cupin domain-containing protein | AMED_RS45110 | Not Available | Negative | 9675764 - 9676117 | 12593.1 |
| vit family protein | AMED_RS45115 | Not Available | Positive | 9676235 - 9676963 | 25033.0 |
| peptide mfs transporter | AMED_RS45120 | Not Available | Negative | 9676965 - 9678422 | 51537.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
