Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS04430 | Not Available | Negative | 920911 - 922035 | 40908.1 |
| adenosine deaminase | AMED_RS04435 | Not Available | Positive | 922249 - 923343 | 39509.9 |
| mfs transporter | AMED_RS04440 | Not Available | Positive | 923444 - 924649 | 41240.0 |
| hypothetical protein | AMED_RS04445 | Not Available | Negative | 924885 - 926156 | 46163.6 |
| rna helicase | AMED_RS04450 | Not Available | Positive | 926308 - 928812 | 92640.0 |
| hypothetical protein | AMED_RS47925 | Not Available | Positive | 928893 - 929039 | 4721.85 |
| nadph-dependent f420 reductase | AMED_RS04455 | Not Available | Negative | 929043 - 929624 | 19627.7 |
| helix-turn-helix domain-containing protein | AMED_RS04460 | Not Available | Positive | 929694 - 930020 | 12145.5 |
| deor family transcriptional regulator | AMED_RS04465 | Not Available | Negative | 930179 - 931159 | 34684.9 |
| zinc-dependent alcohol dehydrogenase family protein | AMED_RS04470 | Not Available | Positive | 931288 - 932292 | 34719.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
