Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4244 domain-containing protein | AMED_RS45025 | Not Available | Negative | 9656237 - 9656413 | 6291.63 |
| type ii secretion system f family protein | AMED_RS45030 | Not Available | Negative | 9656444 - 9657160 | 23908.3 |
| type ii secretion system f family protein | AMED_RS45035 | Not Available | Negative | 9657157 - 9657915 | 26086.3 |
| tada family conjugal transfer-associated atpase | AMED_RS45040 | Not Available | Negative | 9657947 - 9659098 | 40331.7 |
| septum site-determining protein ssd | AMED_RS45045 | Not Available | Negative | 9659573 - 9660640 | 36671.3 |
| had family phosphatase | AMED_RS45050 | Not Available | Positive | 9661280 - 9662110 | 29824.6 |
| glycoside hydrolase family 3 protein | AMED_RS45055 | Not Available | Positive | 9662781 - 9664538 | 61501.5 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | AMED_RS45060 | Not Available | Positive | 9664535 - 9665794 | 45045.8 |
| serine hydrolase domain-containing protein | AMED_RS45065 | Not Available | Positive | 9665842 - 9667572 | 61211.9 |
| murr/rpir family transcriptional regulator | AMED_RS45070 | Not Available | Positive | 9667784 - 9668785 | 34910.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
