Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS44975 | Not Available | Negative | 9642388 - 9642966 | 20477.4 |
| type i dna topoisomerase | AMED_RS44980 | Not Available | Negative | 9643114 - 9645990 | 105040.0 |
| serine protease | AMED_RS44985 | Not Available | Positive | 9646287 - 9647093 | 27969.0 |
| hypothetical protein | AMED_RS44990 | Not Available | Negative | 9647112 - 9647762 | 22501.3 |
| hypothetical protein | AMED_RS44995 | Not Available | Negative | 9647814 - 9648404 | 20140.8 |
| sodium-translocating pyrophosphatase | AMED_RS45000 | Not Available | Negative | 9648561 - 9650855 | 77646.1 |
| dead/deah box helicase | AMED_RS45005 | Not Available | Positive | 9651206 - 9653770 | 89256.2 |
| bifunctional dna primase/polymerase | AMED_RS45010 | Not Available | Negative | 9653863 - 9654480 | 22659.9 |
| rv3654c family tade-like protein | AMED_RS45015 | Not Available | Negative | 9655457 - 9655894 | 14669.5 |
| tade family type iv pilus minor pilin | AMED_RS45020 | Not Available | Negative | 9655881 - 9656216 | 11079.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
