Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | AMED_RS44920 | Not Available | Positive | 9630794 - 9631996 | 45231.3 |
| hepn domain-containing protein | AMED_RS44925 | Not Available | Positive | 9632010 - 9632537 | 19973.7 |
| Trna-thr | Not Available | Not Available | Positive | 9634231 - 9634307 | Not Available |
| hypothetical protein | AMED_RS44940 | Not Available | Positive | 9634442 - 9636109 | 56211.9 |
| dna polymerase iii subunit delta' | AMED_RS44945 | Not Available | Negative | 9636173 - 9637378 | 42611.7 |
| dtmp kinase | AMED_RS44950 | Not Available | Negative | 9637375 - 9639486 | 74249.2 |
| hypothetical protein | AMED_RS44955 | Not Available | Negative | 9639634 - 9640242 | 21751.2 |
| hypothetical protein | AMED_RS44960 | Not Available | Negative | 9640545 - 9641336 | 28678.1 |
| hypothetical protein | AMED_RS44965 | Not Available | Negative | 9641329 - 9641517 | 6461.55 |
| esx secretion-associated protein espg | AMED_RS44970 | Not Available | Negative | 9641510 - 9642301 | 28597.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
