Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS44870 | Not Available | Positive | 9622190 - 9622390 | 6736.52 |
| gntr family transcriptional regulator | AMED_RS44875 | Not Available | Negative | 9622387 - 9622740 | 12559.8 |
| hypothetical protein | AMED_RS44880 | Not Available | Positive | 9622884 - 9623117 | 8194.46 |
| abc transporter permease | AMED_RS44885 | Not Available | Positive | 9623209 - 9623997 | 28299.0 |
| ftsk/spoiiie domain-containing protein | AMED_RS44890 | Not Available | Positive | 9623997 - 9626168 | 78144.7 |
| hypothetical protein | AMED_RS44895 | Not Available | Positive | 9626353 - 9626592 | 9252.25 |
| hypothetical protein | AMED_RS44900 | Not Available | Positive | 9626620 - 9627150 | 19656.6 |
| duf3631 domain-containing protein | AMED_RS44905 | Not Available | Positive | 9627150 - 9628682 | 55311.3 |
| helix-turn-helix domain-containing protein | AMED_RS44910 | Not Available | Positive | 9628679 - 9628909 | 8573.63 |
| tyrosine recombinase xerc | AMED_RS44915 | Not Available | Positive | 9628893 - 9630098 | 44523.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
