Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | AMED_RS44820 | Not Available | Negative | 9613266 - 9614225 | 36697.4 |
| hepn/toprim-associated domain-containing protein | AMED_RS44825 | Not Available | Negative | 9614640 - 9615860 | 45549.9 |
| helix-turn-helix domain-containing protein | AMED_RS44830 | Not Available | Negative | 9616187 - 9617401 | 42928.9 |
| nudix hydrolase | AMED_RS44835 | Not Available | Negative | 9617435 - 9617923 | 18012.7 |
| hypothetical protein | AMED_RS44840 | Not Available | Positive | 9618057 - 9618269 | 7725.76 |
| hypothetical protein | AMED_RS44845 | Not Available | Positive | 9618266 - 9618562 | 11322.4 |
| hypothetical protein | AMED_RS44850 | Not Available | Positive | 9618612 - 9618815 | 7346.7 |
| scr1 family ta system antitoxin-like transcriptional regulator | AMED_RS44855 | Not Available | Positive | 9618812 - 9619606 | 29349.1 |
| phosphotransferase enzyme family protein | AMED_RS44860 | Not Available | Positive | 9619735 - 9620631 | 33342.1 |
| hypothetical protein | AMED_RS44865 | Not Available | Negative | 9620590 - 9622005 | 51157.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
