Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mdr family mfs transporter | AMED_RS44770 | Not Available | Negative | 9602540 - 9604195 | 57816.4 |
| serine hydroxymethyltransferase | AMED_RS44775 | Not Available | Negative | 9604367 - 9605635 | 44533.7 |
| ul11 family ribosomal protein | AMED_RS44780 | Not Available | Negative | 9605785 - 9606210 | 14932.3 |
| gamma carbonic anhydrase family protein | AMED_RS44785 | Not Available | Negative | 9606244 - 9606762 | 18329.1 |
| m14 family metallopeptidase | AMED_RS44790 | Not Available | Negative | 9606901 - 9608106 | 42880.6 |
| tetr/acrr family transcriptional regulator | AMED_RS44795 | Not Available | Negative | 9608213 - 9608800 | 21401.8 |
| grea/greb family elongation factor | AMED_RS44800 | Not Available | Positive | 9608925 - 9609380 | 15824.4 |
| ethd family reductase | AMED_RS44805 | Not Available | Negative | 9609518 - 9609853 | 12145.2 |
| hypothetical protein | AMED_RS44810 | Not Available | Positive | 9610573 - 9612555 | 72778.2 |
| hypothetical protein | AMED_RS44815 | Not Available | Positive | 9612875 - 9613240 | 13400.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
