Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc metalloprotease ftsh | AMED_RS44720 | Not Available | Negative | 9590411 - 9592810 | 86257.6 |
| esx secretion-associated protein espg | AMED_RS44725 | Not Available | Negative | 9593012 - 9593830 | 29510.1 |
| esx secretion-associated protein espg | AMED_RS44730 | Not Available | Negative | 9593928 - 9594713 | 27773.1 |
| hypothetical protein | AMED_RS44735 | Not Available | Negative | 9594774 - 9596189 | 45539.8 |
| hypothetical protein | AMED_RS44740 | Not Available | Negative | 9596213 - 9596578 | 12201.1 |
| hypoxanthine phosphoribosyltransferase | AMED_RS44745 | Not Available | Negative | 9596723 - 9597274 | 19974.1 |
| trna lysidine(34) synthetase tils | AMED_RS44750 | Not Available | Negative | 9597278 - 9598237 | 33602.1 |
| zinc-dependent metalloprotease | AMED_RS44755 | Not Available | Negative | 9598234 - 9599244 | 36078.5 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | AMED_RS44760 | Not Available | Negative | 9599336 - 9601774 | 83991.6 |
| inorganic diphosphatase | AMED_RS44765 | Not Available | Positive | 9601951 - 9602469 | 19624.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
