Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | AMED_RS44670 | Not Available | Negative | 9580456 - 9581367 | 32567.1 |
| rossmann-like and duf2520 domain-containing protein | AMED_RS44675 | Not Available | Negative | 9581364 - 9582269 | 30880.2 |
| prsw family intramembrane metalloprotease | AMED_RS44680 | Not Available | Negative | 9582514 - 9583617 | 39168.1 |
| duf6779 domain-containing protein | AMED_RS44685 | Not Available | Negative | 9584000 - 9586426 | 88528.3 |
| duf3180 domain-containing protein | AMED_RS44690 | Not Available | Negative | 9586496 - 9586957 | 16055.8 |
| merr family transcriptional regulator | AMED_RS44695 | Not Available | Positive | 9587019 - 9587954 | 34804.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | AMED_RS44700 | Not Available | Negative | 9588155 - 9588646 | 17654.8 |
| dihydroneopterin aldolase | AMED_RS44705 | Not Available | Negative | 9588643 - 9589002 | 12979.4 |
| dihydropteroate synthase | AMED_RS44710 | Not Available | Negative | 9588995 - 9589792 | 27528.6 |
| gtp cyclohydrolase i fole | AMED_RS44715 | Not Available | Negative | 9589828 - 9590433 | 22376.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
