Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | AMED_RS44625 | Not Available | Negative | 9570545 - 9573103 | 94778.5 |
| (2fe-2s)-binding protein | AMED_RS44630 | Not Available | Positive | 9573464 - 9574288 | 30409.9 |
| tigr03086 family metal-binding protein | AMED_RS44635 | Not Available | Negative | 9574406 - 9574987 | 19936.6 |
| helix-turn-helix domain-containing protein | AMED_RS44640 | Not Available | Positive | 9575023 - 9575880 | 31458.2 |
| lsr2 family protein | AMED_RS44645 | Not Available | Negative | 9576022 - 9576372 | 12740.8 |
| lysine--trna ligase | AMED_RS44650 | Not Available | Negative | 9576518 - 9578029 | 56240.0 |
| class i sam-dependent methyltransferase | AMED_RS44655 | Not Available | Positive | 9578107 - 9578862 | 27545.5 |
| duf6640 family protein | AMED_RS49780 | Not Available | Positive | 9578896 - 9579237 | 12421.0 |
| type iii pantothenate kinase | AMED_RS44660 | Not Available | Negative | 9579167 - 9579943 | 27303.3 |
| aspartate 1-decarboxylase | AMED_RS44665 | Not Available | Negative | 9579949 - 9580446 | 17692.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
