Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| daunorubicin resistance protein drra family abc transporter atp-binding protein | AMED_RS44580 | Not Available | Positive | 9559832 - 9560809 | 34847.7 |
| abc transporter permease | AMED_RS44585 | Not Available | Positive | 9560806 - 9561615 | 28803.3 |
| btad domain-containing putative transcriptional regulator | AMED_RS44590 | Not Available | Negative | 9561740 - 9564907 | 114245.0 |
| m1 family metallopeptidase | AMED_RS44595 | Not Available | Positive | 9565054 - 9566487 | 52010.8 |
| pyroglutamyl-peptidase i | AMED_RS44600 | Not Available | Positive | 9566555 - 9567196 | 21987.4 |
| hypothetical protein | AMED_RS44605 | Not Available | Negative | 9567193 - 9567846 | 21869.5 |
| hsp70 family protein | AMED_RS44610 | Not Available | Negative | 9567946 - 9569652 | 61080.1 |
| helix-turn-helix domain-containing protein | AMED_RS44615 | Not Available | Negative | 9569713 - 9570075 | 13223.6 |
| type ii toxin-antitoxin system rele/pare family toxin | AMED_RS49770 | Not Available | Negative | 9570079 - 9570270 | 7104.47 |
| hypothetical protein | AMED_RS49775 | Not Available | Negative | 9570267 - 9570443 | 6787.99 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
