Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AMED_RS00350 | Not Available | Positive | 73082 - 74026 | 33156.6 |
| abc transporter permease | AMED_RS00355 | Not Available | Positive | 74026 - 74832 | 28233.4 |
| abc transporter atp-binding protein | AMED_RS00360 | Not Available | Positive | 74829 - 75560 | 26150.8 |
| abc transporter atp-binding protein | AMED_RS00365 | Not Available | Positive | 75557 - 76330 | 28384.2 |
| aldehyde dehydrogenase family protein | AMED_RS00370 | Not Available | Positive | 76323 - 77735 | 49374.3 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS00375 | Not Available | Positive | 77732 - 78487 | 26062.0 |
| amidase | AMED_RS00380 | Not Available | Positive | 78497 - 79882 | 48329.5 |
| is110 family transposase | AMED_RS00385 | Not Available | Negative | 79955 - 81166 | 43511.7 |
| rna polymerase sigma factor | AMED_RS00390 | Not Available | Positive | 81407 - 81928 | 19126.6 |
| cu044_5270 family protein | AMED_RS00395 | Not Available | Positive | 81921 - 82814 | 31135.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
