Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sir2 family nad-dependent protein deacetylase | AMED_RS44530 | Not Available | Positive | 9549521 - 9550342 | 29339.1 |
| zinc metalloprotease htpx | AMED_RS44535 | Not Available | Positive | 9550728 - 9551915 | 42335.7 |
| type iv secretory system conjugative dna transfer family protein | AMED_RS44540 | Not Available | Positive | 9551923 - 9553305 | 49292.8 |
| hypothetical protein | AMED_RS44545 | Not Available | Positive | 9553302 - 9553775 | 18179.2 |
| hypothetical protein | AMED_RS44550 | Not Available | Positive | 9553772 - 9555856 | 75096.6 |
| hypothetical protein | AMED_RS44555 | Not Available | Positive | 9555861 - 9556256 | 15486.0 |
| zinc ribbon domain-containing protein | AMED_RS44560 | Not Available | Positive | 9556253 - 9557437 | 42105.4 |
| hypothetical protein | AMED_RS49345 | Not Available | Negative | 9557438 - 9558097 | 22553.6 |
| hypothetical protein | AMED_RS44570 | Not Available | Positive | 9558216 - 9558704 | 17534.2 |
| endonuclease/exonuclease/phosphatase family protein | AMED_RS44575 | Not Available | Negative | 9558709 - 9559725 | 35558.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
