Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter solute-binding protein, zn/mn family | AMED_RS44480 | Not Available | Negative | 9539728 - 9540642 | 31080.4 |
| laci family dna-binding transcriptional regulator | AMED_RS44485 | Not Available | Positive | 9540829 - 9541929 | 39042.7 |
| carbonic anhydrase | AMED_RS44490 | Not Available | Positive | 9542030 - 9542521 | 18277.8 |
| glycosyltransferase | AMED_RS44495 | Not Available | Positive | 9542568 - 9543518 | 33222.0 |
| a/g-specific adenine glycosylase | AMED_RS44500 | Not Available | Positive | 9543528 - 9544403 | 31555.6 |
| n-acetylmuramoyl-l-alanine amidase | AMED_RS44505 | Not Available | Positive | 9544467 - 9545423 | 34046.1 |
| alpha/beta fold hydrolase | AMED_RS44510 | Not Available | Negative | 9545554 - 9546300 | 27261.2 |
| m1 family metallopeptidase | AMED_RS44515 | Not Available | Positive | 9546376 - 9547791 | 51264.0 |
| aaa family atpase | AMED_RS44520 | Not Available | Negative | 9547777 - 9549165 | 49148.3 |
| antibiotic biosynthesis monooxygenase | AMED_RS44525 | Not Available | Positive | 9549217 - 9549528 | 11212.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
