Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| card family transcriptional regulator | AMED_RS44380 | Not Available | Positive | 9522192 - 9522683 | 18100.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | AMED_RS44385 | Not Available | Positive | 9522831 - 9523445 | 21122.5 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | AMED_RS44390 | Not Available | Positive | 9523442 - 9523909 | 15512.3 |
| ppox class f420-dependent oxidoreductase | AMED_RS44395 | Not Available | Positive | 9523938 - 9524333 | 14453.2 |
| ppox class f420-dependent oxidoreductase | AMED_RS44400 | Not Available | Positive | 9524344 - 9524730 | 14023.4 |
| had family hydrolase | AMED_RS44405 | Not Available | Positive | 9524753 - 9525439 | 25328.1 |
| cysteine--trna ligase | AMED_RS44410 | Not Available | Positive | 9525483 - 9526871 | 50915.7 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | AMED_RS44415 | Not Available | Positive | 9526901 - 9527857 | 33394.2 |
| mboat family protein | AMED_RS44420 | Not Available | Positive | 9527910 - 9529343 | 53259.9 |
| histidine phosphatase family protein | AMED_RS44425 | Not Available | Positive | 9529542 - 9530147 | 22401.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
