Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine exporter thre family protein | AMED_RS44330 | Not Available | Positive | 9509900 - 9511405 | 52159.1 |
| trehalose-6-phosphate synthase | AMED_RS44335 | Not Available | Positive | 9511487 - 9512929 | 53544.0 |
| trehalose-phosphatase | AMED_RS44340 | Not Available | Positive | 9512964 - 9515498 | 92241.7 |
| hypothetical protein | AMED_RS44345 | Not Available | Positive | 9515586 - 9516113 | 18963.7 |
| helix-turn-helix transcriptional regulator | AMED_RS44350 | Not Available | Positive | 9516207 - 9516779 | 22325.3 |
| s9 family peptidase | AMED_RS44355 | Not Available | Positive | 9516823 - 9518097 | 45362.7 |
| rna polymerase sigma factor | AMED_RS44360 | Not Available | Positive | 9518176 - 9518769 | 21728.8 |
| cu044_5270 family protein | AMED_RS44365 | Not Available | Positive | 9518762 - 9519817 | 37501.3 |
| dna repair protein rada | AMED_RS44370 | Not Available | Negative | 9519818 - 9521176 | 47068.9 |
| hypothetical protein | AMED_RS44375 | Not Available | Negative | 9521216 - 9521905 | 22713.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
