Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2079 domain-containing protein | AMED_RS44230 | Not Available | Positive | 9484278 - 9485603 | 47573.4 |
| duf4232 domain-containing protein | AMED_RS44235 | Not Available | Negative | 9485726 - 9486337 | 20143.6 |
| chat domain-containing tetratricopeptide repeat protein | AMED_RS44240 | Not Available | Negative | 9486466 - 9489012 | 89842.1 |
| hypothetical protein | AMED_RS44245 | Not Available | Negative | 9489097 - 9489582 | 17531.9 |
| rna polymerase sigma factor | AMED_RS44250 | Not Available | Negative | 9489579 - 9490154 | 21485.8 |
| s8 family serine peptidase | AMED_RS44255 | Not Available | Negative | 9490151 - 9491776 | 56812.1 |
| spvb/tcac n-terminal domain-containing protein | AMED_RS44260 | Not Available | Positive | 9491975 - 9495115 | 113415.0 |
| rna polymerase sigma factor sigj | AMED_RS44265 | Not Available | Negative | 9495084 - 9495965 | 31393.6 |
| carboxymuconolactone decarboxylase family protein | AMED_RS44270 | Not Available | Positive | 9496127 - 9496522 | 13937.8 |
| alpha-l-fucosidase | AMED_RS44275 | Not Available | Positive | 9496630 - 9499440 | 101046.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
