Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | AMED_RS44180 | Not Available | Positive | 9475368 - 9476150 | 28127.9 |
| l-lactate permease | AMED_RS44185 | Not Available | Positive | 9476182 - 9477873 | 59435.1 |
| hd family hydrolase | AMED_RS44190 | Not Available | Positive | 9477883 - 9478434 | 20341.0 |
| rna polymerase sigma factor | AMED_RS44195 | Not Available | Negative | 9478431 - 9479696 | 46269.6 |
| ycii family protein | AMED_RS44200 | Not Available | Negative | 9479736 - 9480086 | 12489.0 |
| ycii family protein | AMED_RS44205 | Not Available | Negative | 9480091 - 9480516 | 15413.2 |
| hypothetical protein | AMED_RS44210 | Not Available | Positive | 9480702 - 9480971 | 10760.0 |
| small ribosomal subunit rsm22 family protein | AMED_RS44215 | Not Available | Positive | 9480996 - 9481985 | 34785.3 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS44220 | Not Available | Negative | 9481982 - 9482818 | 30358.4 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS44225 | Not Available | Positive | 9482884 - 9484221 | 47501.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
