Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gas vesicle protein | AMED_RS44130 | Not Available | Negative | 9467237 - 9467524 | 9437.47 |
| gvpl/gvpf family gas vesicle protein | AMED_RS44135 | Not Available | Negative | 9467517 - 9468251 | 26712.4 |
| gas vesicle protein | AMED_RS44140 | Not Available | Negative | 9468248 - 9468547 | 10636.7 |
| gas vesicle protein | AMED_RS44145 | Not Available | Negative | 9468565 - 9468909 | 12066.2 |
| response regulator transcription factor | AMED_RS44150 | Not Available | Negative | 9469095 - 9469775 | 25522.6 |
| cell wall metabolism sensor histidine kinase walk | AMED_RS44155 | Not Available | Negative | 9469775 - 9471163 | 49184.0 |
| type 1 glutamine amidotransferase | AMED_RS44160 | Not Available | Negative | 9471234 - 9471956 | 24953.2 |
| murt ligase domain-containing protein | AMED_RS44165 | Not Available | Negative | 9471949 - 9473178 | 43916.6 |
| nadp-dependent oxidoreductase | AMED_RS44170 | Not Available | Negative | 9473235 - 9474146 | 30261.3 |
| tetr/acrr family transcriptional regulator | AMED_RS44175 | Not Available | Positive | 9474223 - 9474786 | 20042.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
