Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AMED_RS44080 | Not Available | Positive | 9459887 - 9461800 | 68416.9 |
| 2-keto-4-pentenoate hydratase | AMED_RS44085 | Not Available | Negative | 9462277 - 9463038 | 26227.4 |
| 2-keto-4-pentenoate hydratase | AMED_RS44090 | Not Available | Negative | 9463035 - 9463841 | 27575.9 |
| voc family protein | AMED_RS44095 | Not Available | Positive | 9463980 - 9464483 | 18349.6 |
| hypothetical protein | AMED_RS44100 | Not Available | Positive | 9464540 - 9465112 | 21236.6 |
| coa-binding protein | AMED_RS44105 | Not Available | Positive | 9465136 - 9465537 | 14040.9 |
| nhl repeat-containing protein | AMED_RS44110 | Not Available | Negative | 9465534 - 9466061 | 18221.2 |
| gvpl/gvpf family gas vesicle protein | AMED_RS44115 | Not Available | Negative | 9466136 - 9466696 | 20114.8 |
| gas vesicle protein gvpj | AMED_RS44120 | Not Available | Negative | 9466693 - 9467010 | 10902.4 |
| gas vesicle protein k | AMED_RS44125 | Not Available | Negative | 9467007 - 9467240 | 8318.13 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
