Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | AMED_RS04330 | Not Available | Positive | 898387 - 898887 | 17436.0 |
| inner membrane protein yhjd | AMED_RS04335 | Not Available | Positive | 899131 - 900141 | 35721.3 |
| acyl-coa dehydrogenase family protein | AMED_RS04340 | Not Available | Positive | 900200 - 901309 | 38934.2 |
| helix-turn-helix domain-containing protein | AMED_RS04345 | Not Available | Positive | 901306 - 901743 | 15747.0 |
| d-alanyl-d-alanine carboxypeptidase family protein | AMED_RS04350 | Not Available | Negative | 901740 - 902984 | 42338.8 |
| sco4848 family membrane protein | AMED_RS04355 | Not Available | Positive | 903028 - 903267 | 8801.71 |
| s8 family serine peptidase | AMED_RS04360 | Not Available | Positive | 903331 - 904728 | 47348.6 |
| hypothetical protein | AMED_RS04365 | Not Available | Negative | 905016 - 905930 | 34033.4 |
| succinate dehydrogenase iron-sulfur subunit | AMED_RS04370 | Not Available | Negative | 906061 - 906831 | 28919.4 |
| succinate dehydrogenase flavoprotein subunit | AMED_RS04375 | Not Available | Negative | 906831 - 908585 | 64318.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
