Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-epoxybenzoyl-coa dihydrolase | AMED_RS44030 | Not Available | Negative | 9450937 - 9452556 | 60115.9 |
| hypothetical protein | AMED_RS44035 | Not Available | Negative | 9452588 - 9453013 | 15534.9 |
| gnat family n-acetyltransferase | AMED_RS44040 | Not Available | Negative | 9453093 - 9453995 | 33543.8 |
| glycoside hydrolase family 3 protein | AMED_RS44045 | Not Available | Negative | 9454149 - 9456638 | 88851.2 |
| tetr/acrr family transcriptional regulator | AMED_RS44050 | Not Available | Positive | 9456734 - 9457315 | 21494.6 |
| helix-turn-helix domain-containing protein | AMED_RS44055 | Not Available | Negative | 9457317 - 9457772 | 17054.5 |
| dihydrofolate reductase family protein | AMED_RS44060 | Not Available | Positive | 9457862 - 9458449 | 20375.1 |
| ppox class f420-dependent oxidoreductase | AMED_RS44065 | Not Available | Positive | 9458476 - 9458859 | 14092.9 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS44070 | Not Available | Negative | 9458882 - 9459328 | 16222.5 |
| duf1579 family protein | AMED_RS44075 | Not Available | Positive | 9459378 - 9459845 | 17276.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
