Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf445 domain-containing protein | AMED_RS43980 | Not Available | Negative | 9441532 - 9442767 | 46071.2 |
| abi-alpha family protein | AMED_RS43985 | Not Available | Negative | 9442771 - 9443553 | 28375.8 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS43990 | Not Available | Positive | 9443636 - 9444457 | 30712.4 |
| lipopolysaccharide assembly lapa domain-containing protein | AMED_RS43995 | Not Available | Negative | 9444454 - 9444891 | 14958.3 |
| dipeptidase | AMED_RS44000 | Not Available | Negative | 9444938 - 9446077 | 41077.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS44005 | Not Available | Positive | 9446179 - 9446625 | 16264.6 |
| voc family protein | AMED_RS44010 | Not Available | Positive | 9446674 - 9447054 | 13438.8 |
| amidohydrolase family protein | AMED_RS44015 | Not Available | Negative | 9447106 - 9447960 | 31165.3 |
| benzoate-coa ligase family protein | AMED_RS44020 | Not Available | Negative | 9447957 - 9449501 | 54530.1 |
| benzoyl-coa 2,3-epoxidase subunit boxb | AMED_RS44025 | Not Available | Negative | 9449510 - 9450931 | 54335.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
