Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS43930 | Not Available | Positive | 9428143 - 9429024 | 32189.1 |
| hypothetical protein | AMED_RS43935 | Not Available | Positive | 9429331 - 9429996 | 22679.2 |
| btad domain-containing putative transcriptional regulator | AMED_RS43940 | Not Available | Negative | 9430279 - 9433026 | 99198.4 |
| ectoine hydroxylase | AMED_RS43945 | Not Available | Negative | 9433538 - 9434440 | 32998.6 |
| ectoine synthase | AMED_RS43950 | Not Available | Negative | 9434471 - 9434863 | 14679.3 |
| diaminobutyrate--2-oxoglutarate transaminase | AMED_RS43955 | Not Available | Negative | 9434875 - 9436128 | 45176.0 |
| diaminobutyrate acetyltransferase | AMED_RS43960 | Not Available | Negative | 9436144 - 9436653 | 18507.8 |
| patatin-like protein | AMED_RS43965 | Not Available | Negative | 9436878 - 9439967 | 109447.0 |
| zinc-dependent alcohol dehydrogenase family protein | AMED_RS43970 | Not Available | Negative | 9440074 - 9441060 | 34500.1 |
| helix-turn-helix domain-containing protein | AMED_RS43975 | Not Available | Positive | 9441176 - 9441535 | 13353.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
