Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine dehydratase | AMED_RS43880 | Not Available | Positive | 9418613 - 9419563 | 33037.7 |
| mfs transporter | AMED_RS43885 | Not Available | Negative | 9419577 - 9421097 | 50923.2 |
| gntr family transcriptional regulator | AMED_RS43890 | Not Available | Negative | 9421143 - 9421898 | 27635.6 |
| sis domain-containing protein | AMED_RS43895 | Not Available | Positive | 9422047 - 9423093 | 36164.4 |
| n-acetylglucosamine kinase | AMED_RS43900 | Not Available | Positive | 9423090 - 9424055 | 31957.0 |
| duf3159 domain-containing protein | AMED_RS43905 | Not Available | Negative | 9424157 - 9424816 | 23012.6 |
| sgnh/gdsl hydrolase family protein | AMED_RS43910 | Not Available | Positive | 9425085 - 9425900 | 30177.1 |
| ompa family protein | AMED_RS43915 | Not Available | Positive | 9426438 - 9427187 | 25957.8 |
| hypothetical protein | AMED_RS43920 | Not Available | Positive | 9427202 - 9427612 | 15481.8 |
| duf6932 family protein | AMED_RS43925 | Not Available | Positive | 9427670 - 9428146 | 17438.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
