Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | AMED_RS43830 | Not Available | Positive | 9409844 - 9411481 | 60807.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | AMED_RS43835 | Not Available | Positive | 9411478 - 9412275 | 27425.8 |
| phosphatidylinositol-specific phospholipase c domain-containing protein | AMED_RS43840 | Not Available | Negative | 9412359 - 9413369 | 36250.2 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | AMED_RS43845 | Not Available | Positive | 9413473 - 9414291 | 28375.3 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS43850 | Not Available | Negative | 9414308 - 9414736 | 15064.0 |
| thiazole synthase | AMED_RS43855 | Not Available | Negative | 9414897 - 9415655 | 26141.6 |
| sulfur carrier protein this | AMED_RS43860 | Not Available | Negative | 9415657 - 9415857 | 6660.99 |
| glycine oxidase thio | AMED_RS43865 | Not Available | Negative | 9415857 - 9416930 | 38102.7 |
| thiamine phosphate synthase | AMED_RS43870 | Not Available | Positive | 9417061 - 9417720 | 22847.2 |
| hypothetical protein | AMED_RS43875 | Not Available | Negative | 9417722 - 9418465 | 24826.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
