Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glsb/yeaq/ymge family stress response membrane protein | AMED_RS43780 | Not Available | Positive | 9399530 - 9399814 | 9916.38 |
| hypothetical protein | AMED_RS43785 | Not Available | Negative | 9399854 - 9400084 | 8344.95 |
| phosphatidylserine decarboxylase | AMED_RS43790 | Not Available | Positive | 9400333 - 9401058 | 25505.0 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | AMED_RS43795 | Not Available | Positive | 9401062 - 9402012 | 34569.0 |
| aaa family atpase | AMED_RS43800 | Not Available | Positive | 9402253 - 9404520 | 78852.7 |
| lytr c-terminal domain-containing protein | AMED_RS43805 | Not Available | Negative | 9404669 - 9405313 | 21087.1 |
| duf3263 domain-containing protein | AMED_RS43810 | Not Available | Negative | 9405310 - 9405618 | 11878.4 |
| peptide deformylase | AMED_RS43815 | Not Available | Positive | 9405774 - 9406352 | 21297.1 |
| glycoside hydrolase family 15 protein | AMED_RS43820 | Not Available | Negative | 9406405 - 9408570 | 77973.6 |
| s1c family serine protease | AMED_RS43825 | Not Available | Positive | 9408769 - 9409680 | 30730.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
