Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS49335 | Not Available | Negative | 9379286 - 9379669 | 13570.0 |
| copper homeostasis protein | AMED_RS43685 | Not Available | Negative | 9379962 - 9380639 | 23806.3 |
| nitrate- and nitrite sensing domain-containing protein | AMED_RS43690 | Not Available | Negative | 9380652 - 9383435 | 100369.0 |
| abc transporter substrate-binding protein | AMED_RS43695 | Not Available | Positive | 9383622 - 9384587 | 33014.8 |
| hypothetical protein | AMED_RS43700 | Not Available | Negative | 9384592 - 9385203 | 21503.5 |
| dna repair helicase xpb | AMED_RS43705 | Not Available | Positive | 9385293 - 9386939 | 60914.7 |
| hypothetical protein | AMED_RS43710 | Not Available | Negative | 9386946 - 9387125 | 6599.0 |
| duf4253 domain-containing protein | AMED_RS43715 | Not Available | Positive | 9387383 - 9388144 | 27624.9 |
| duf72 domain-containing protein | AMED_RS43720 | Not Available | Positive | 9388726 - 9389571 | 32068.3 |
| o-succinylbenzoate synthase | AMED_RS43725 | Not Available | Positive | 9389636 - 9390565 | 32129.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
