Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent malic enzyme | AMED_RS43580 | Not Available | Negative | 9357564 - 9358952 | 48388.9 |
| hypothetical protein | AMED_RS43585 | Not Available | Negative | 9359064 - 9359243 | 6483.52 |
| helicase-associated domain-containing protein | AMED_RS43590 | Not Available | Positive | 9359334 - 9361571 | 78489.9 |
| hypothetical protein | AMED_RS43595 | Not Available | Positive | 9361628 - 9362197 | 18653.8 |
| duf742 domain-containing protein | AMED_RS49330 | Not Available | Negative | 9362194 - 9362736 | 19728.6 |
| roadblock/lc7 domain-containing protein | AMED_RS43605 | Not Available | Negative | 9363682 - 9364098 | 14279.2 |
| atp/gtp-binding protein | AMED_RS43610 | Not Available | Negative | 9364501 - 9365109 | 21709.8 |
| duf742 domain-containing protein | AMED_RS43615 | Not Available | Negative | 9365090 - 9365869 | 28520.2 |
| roadblock/lc7 domain-containing protein | AMED_RS43620 | Not Available | Negative | 9365895 - 9366356 | 15728.9 |
| nitrate- and nitrite sensing domain-containing protein | AMED_RS43625 | Not Available | Negative | 9366377 - 9369517 | 111843.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
